whynotfab
+1y
I'm not too familiar with using the stock compressors, but have heard sometimes that it'll work for a while.. or sometimes it'll work for a while then lock up.
If you're doing away with the AC anyway, and have the room.. you could fab or have some brackets fabbed to use one of the EDCs more suited for the application.
Here are some good info threads on York and Sanden compressors:
York - Facts & Info
York - Contact Info & Part Numbers
Sanden - Facts & Info
Tips for EDC Owners