hex0rz
+1y
Closing the gap on the plugs is like putting a band-aid on it. If I were you, I would suggest that hoc has the right idea. I suspect it is something of the likes with your valve timing, etc. Your valves cannot be adjusted since its hydro and all, so maybe it is your cam? The lobes could be worn down for the problematic cylinders. Hence why the valves act as they do causing cooler exhaust temps.
That would be my take on it... I'm curious, you say it runs strong and smooth, but yet it does'nt run well? What is your point of asking this question? Is it actually causing a problem?
BTW, I use the yellow port caps. They are like 1/32" smaller than the ports and are a bit of a struggle to get on, but they certainly do a good job staying on!
Check to see what your timing is. What about the spark plug wires? Anything that could lead to an incomplete burn... Your exhaust temp. is suppose to be hot not as cool as 200 or so degrees. Your exhaust manifold or header is supposed to be about 1200 degrees!